R CANDO cluster Config

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Installing R

 yum -y install R R-devel R-core libcurl-devel libxml2-devel

Building Rmpi

 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib64/openmpi/lib
 export PATH=$PATH:/usr/lib64/openmpi/bin
 Start R
 install.packages("Rmpi",configure.args=c("--with-Rmpi-include=/usr/include/openmpi-x86_64",
 "--with-Rmpi-libpath=/usr/lib64/openmpi/lib/","--with-Rmpi-type=OPENMPI",
 "CPPFLAGS=-I/usr/include/openmpi-x86_64","LDFLAGS=-L/usr/lib64/openmpi/lib"))

Installing other R packages

 From within R: 
   install.packages("snow")
   install.packages("snowfall")
   install.packages("RCurl")
   install.packages("XML")
   install.packages("e1071")
   install.packages("waveslim")
   install.packages("evd")
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